02114nas a2200313 4500000000100000008004100001260001500042653001600057653002000073653001700093653001400110653001500124653001200139653002100151653001900172100001500191700001400206700001300220700001500233700001400248700001000262700000900272700001200281700001500293245005200308856004600360300000700406520138700413 2018 d bIntechOpen10aAncient DNA10aAncient leprosy10aEpidemiology10aEvolution10aGenotyping10aleprosy10aLipid biomarkers10aPaleopathology1 aDonoghue H1 aTaylor MG1 aMendum T1 aStewart GR1 aRigouts L1 aLee O1 aWu H1 aBesra G1 aMinnikin D00aThe Distribution and Origins of Ancient Leprosy uhttps://cdn.intechopen.com/pdfs/60017.pdf a303 a

Human leprosy is primarily caused by Mycobacterium leprae, but also by the related ‘M.  lepromatosis’. Ancient leprosy can be recognised in archaeological materials by the paleopathology associated with multi-bacillary or lepromatous forms of the disease. Whole M. leprae genomes have been obtained from human skeletons, and diagnostic aDNA fragments have been recovered. The derived M. leprae phylogenies, based on single nucleotide polymorphisms, mirror past human migrations, as M. leprae is usually an obligate pathogen. The detection of M. leprae in historical leprosy cases is assisted by the hydrophobic M. leprae cell envelope, which is composed of unusual lipids that can be used as specific biomarkers. Lipid biomarkers are more stable than aDNA and can be detected directly without amplification. Indigenous human leprosy is extinct in Western Europe, but recently, both M. leprae and ‘M. lepromatosis’ were found in British red squirrels. Leprosy may also be found in ninebanded armadillos (Dasypus  novemcinctus) where it can cause a zoonotic human infection. Certain leprosy-like diseases, caused by uncultivable species in cats, for example, may be related to M. leprae. The closest extant relatives of leprosy bacilli are probably members of the M.  haemophilum taxon, emerging pathogens with genomic and lipid biomarker similarities.